Fig. 2: Taxa associated with susceptibility and resistance using 16S rRNA sequencing.
From: The gut microbiome is associated with susceptibility to febrile malaria in Malian children
Percentage of the mouse microbiome that is A Eubacterium coprostanoligenes, B Gemmiger formicilis, C Anaerostipes hadrus, D Roseburia faecis, E Clostridum citroniae, F Dorea longicatena, G Coprococcus comes, H Blautia faecis, I Bacteroides intestinalis, J Bacteroides ovatus, K Clostridium sp. FS41, and L Ruminococcus sp. Marseille-P328. Percentage of the human microbiome that is M Streptococcus thermophilus, N Ruminococcus sp. 5_1_39BFAA, O Dorea (metagenome), and P Blautia (unclassified). P values were determined using DESeq2 (∗), corncob (†), MaAsLin2 (‡), and ALDEx2 (§). Data were normalized using the default method for each tool: relative log expression (RLE), no normalization, total sum scaling (TSS), and no normalization, respectively, and the Benjamini–Hochberg method was used to control for multiple comparisons. Blue circles indicate resistant children or low parasitemia mice, and red circles indicate susceptible children or high parasitemia mice. Median indicated on graphs. n = 20 for the resistant mice and n = 12 for the susceptible mice. n = 24 for the resistant children and n = 46 for the susceptible children.
