Fig. 2: OAK paired snRNA-Seq and snATAC-Seq on the human peripheral retina. | Nature Communications

Fig. 2: OAK paired snRNA-Seq and snATAC-Seq on the human peripheral retina.

From: Overloading And unpacKing (OAK) - droplet-based combinatorial indexing for ultra-high throughput single-cell multiomic profiling

Fig. 2

a Uniform Manifold Approximation and Projection (UMAP) of snRNA-Seq data with table of number and percentage of each cell type. The color of the dot in the table indicates the position in the UMAP. b Heatmap displaying OCRs in each cell type. c Chromatin tracks in major cell types for the genomic region spanning the ARR3 gene with a Ridge plot (expression values are normalized and log transformed) indicating gene expression of ARR3 from snRNA-Seq data. d Chromatin tracks in bipolar cell types for the genomic region including the TSS of DOK5, with a Ridge plot indicating DOK5 expression level. e Significant transcription factors by weighted gene activity for each major cell type. Differential activity was determined using a one-sided t-test adjusted for multiple comparisons. Source data are provided as a Source Data file.

Back to article page