Table 2 DevCCF template descriptors by age

From: Developmental mouse brain common coordinate framework

Age

MRI samples (female, unknown)

LSFM samples (female)

MRI resolutiona (µm isotropic)

Template contents

Mean brain volume ± SD (mm3)

Number of labels

E11.5

6 (1, 1)

10 (5)

31.5

Embryo

5.32 ± 0.55

77

E13.5

9 (3, 1)

10 (5)

34

Head (MRI)

Embryo (LSFM)

19.01 ± 1.00

98

E15.5

9 (2, 4)

9 (4)

37.5

Head (MRI)

Embryo (LSFM)

41.69 ± 5.26

141

E18.5

8 (3,0)

9 (4)

40

Head (MRI)

Brain (LSFM)

83.98 ± 3.50

146

P04

10 (0,9)

7 (4)

50

Brain

192.15 ± 22.02

192

P14

14 (5,0)

10 (5)

50

Brain

380.48 ± 8.54

288

P56

10 (5,0)

6 (3)

50

Brain

435.77 ± 11.49

288

  1. Template descriptors include sample size used to develop each template by sample sex, resolution of MRI templates, template contents (whole embryo, whole head, or whole brain), mean brain volume and standard deviation, and the number of annotated labels at each age. Mean brain volume calculated from source data file for Supplementary Fig. 5. aDevCCF template resolution is given for MRI templates. Aligned LSFM templates and annotations are 20 μm isotropic.
Back to article page