Fig. 2: Comparison of epigenetic features associated with chromatin loops and gene expression between WT and pds5a/b/c/e.
From: Mutations of PDS5 genes enhance TAD-like domain formation in Arabidopsis thaliana
a Proportion of chromatin loop sizes in WT and pds5a/b/c/e. Loops smaller than 10 kb, between 10 and 50 kb, and bigger than 50 kb are included. Blue scaled bars indicate those loops in pds5a/b/c/e which are also identified in wild-type plants. b, c Genomic features at regions annotated with chromatin loops, which are illustrated as the green area in each plot. The blue and black curves refer to individual loop anchor regions. d–h Enrichment of epigenetic marks around chromatin regions that form loops with protein-coding genes. These regions are divided into five groups according to expression levels of their interacting protein-coding genes. The color gradient from blue via gray to red represents ascending gene expression.
