Fig. 2: E. coli PanSelect enriches E. coli DNA without bias from a 4-strain mock community. | Nature Communications

Fig. 2: E. coli PanSelect enriches E. coli DNA without bias from a 4-strain mock community.

From: Distinct Escherichia coli transcriptional profiles in the guts of recurrent UTI sufferers revealed by pangenome hybrid selection

Fig. 2

a The RAs of the four E. coli strains, pre- and post-HS (hybrid selection), calculated using StrainGE. b Average depth of coverage pre- and post-HS for each strain. c Genome coverage pre-HS (thin lines) and post-HS (thick lines) for each strain. The dashed vertical line represents 5x coverage. d Average depth of coverage in relation to the closest predicted probe binding site(s), for each of the four strains. “1 probe” and “2+ probes” indicate regions where probes are predicted to bind. Error bars denote standard deviations. Numbers above error bars indicate the number of positions across the genome in each category. Thin lines represent pre-HS data; thick lines post-HS data. Source data are provided as a Source Data file.

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