Table 1 Informatics software and tools in lipidomics
From: MS-DIAL 5 multimodal mass spectrometry data mining unveils lipidome complexities
Software name | MS-DIAL 5 | MS-DIAL 4 | Lipostar 2.0 | LDA2 | LipidFinder 2.0 | XCMS online | mzmine | LipidHunter2 |
---|---|---|---|---|---|---|---|---|
DI-MS (Full MS) | ✓ | ✓ | ||||||
DI-MS (DDA) | ✓ | ✓ | ✓ | |||||
DI-MS (DIA) | ✓ | ✓ | ||||||
IM-MS (Full MS) | ✓ | ✓ | ||||||
IM-MS (DDA) | ✓ | ✓ | ||||||
IM-MS (DIA) | ✓ | ✓ | ||||||
LC-MS (Full MS) | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | |
LC-MS (DDA) | ✓ | ✓ | ✓ | ✓ | ✓ | ✓ | ||
LC-MS (DIA) | ✓ | ✓ | ✓ | ✓ | ||||
LC-IM-MS (Full MS) | ✓ | ✓ | ✓ | ✓ | ||||
LC-IM-MS (PASEF) | ✓ | ✓ | ✓ | ✓ | ||||
LC-IM-MS (diaPASEF) | ✓ | |||||||
In-depth lipid annotation using EAD | ✓ | |||||||
MSI | ✓ | ✓ |