Fig. 2: Somatic variants in clonally propagated ‘Fuji’ varieties. | Nature Communications

Fig. 2: Somatic variants in clonally propagated ‘Fuji’ varieties.

From: Genome sequencing of ‘Fuji’ apple clonal varieties reveals genetic mechanism of the spur-type morphology

Fig. 2

a Pipeline for somatic variant detection. Each read is aligned to Fuji_Ral and Fuji_Del, respectively, and then assigned to the optimal haploid genome based on the alignment quality. b Densities of somatic SNPs across different gene features. c Number of different types of somatic SNPs. d Distribution of different types of somatic SNPs in each variety. Source data are provided as a Source Data file.

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