Table 2 List of DNA oligonucleotides used in this study

From: A core network in the SARS-CoV-2 nucleocapsid NTD mediates structural integrity and selective RNA-binding

Name

Sequence (5’ - > 3’)

Usage

xFW

GGTCTCGAGAATCTTTATTTTCAGGGCAGCCGTCCACAAGGTCTCCCTAAC

Cloning of NTDxtal_WT(Gibson assembly)

xRV

GTTAGCAGCCGGATCCCGACCCTTATTCTGCATAAAAGCCCTTTGGGAGCGTTGTGCCTTG

Cloning of NTDxtal_WT(Gibson assembly)

D63G_FW

CAGCATGGCAAAGAAGGGTTGAAGTTTCCCCGGG

SDM Mutagenesisa

D63G_RV

GGTTAGGGCCGTGAACCAGG

SDM Mutagenesisa

P67S_FW

CAAAGAAGATTTGAAGTTTAGTCGGGGACAGGGGGTTC

SDM Mutagenesisa

P67S_RV

CCATGCTGGGTTAGGGCC

SDM Mutagenesisa

P80R_FW

GAACAGCTCGCGGGATGATCAAATTGG

SDM Mutagenesisa

P80R_RV

GTGTTGATCGGAACCCCCTG

SDM Mutagenesisa

A119S_FW

GTCCCGAATCAGGCCTGCCGTATG

SDM Mutagenesisa

A119S_RV

CAGTGCCCAGATAGTAAAAGTACCATC

SDM Mutagenesisa

E136D_FW

GTCGCAACCGACGGTGCGCTCAATAC

SDM Mutagenesisa

E136D_RV

CCAAATAATGCCGTCTTTATTAGCACC

SDM Mutagenesisa

P151S_FW

CACTCGCAACTCGGCGAATAACG

SDM Mutagenesisa

P151S_RV

CCAATGTGGTCCTTCGGGG

SDM Mutagenesisa

Q58I_FW

GTTCACGGCCCTAACCATTCATGGCAAAGAAGATTTGAAG

SDM Mutagenesisa

Q58I_RV

CAGGAAGCCGTGTTATTAGGAAGTCC

SDM Mutagenesisa

S105I_FW

GAAAGACTTAATTCCGCGATGGTAC

SDM Mutagenesisa

S105I_RV

ATTTTCCCATCGCCACCA

SDM Mutagenesisa

Y109A_FW

GAAAATGAAAGACTTAAGTCCGCGATGGGCGTTTTACTATCTGGGCACTG

SDM Mutagenesisa

Y109A_RV

CCATCGCCACCACGGATACG

SDM Mutagenesisa

R107A_FW

GACTTAAGTCCGGCGTGGTACTTTTACTATCTG

SDM Mutagenesisa

R107A_RV

CAGATAGTAAAAGTACCACGCCGGACTTAAGTC

SDM Mutagenesisa

W108G_FW

GAAAGACTTAAGTCCGCGAGGGTACTTTTACTATCTGGG

SDM Mutagenesisa

W108G_RV

ATTTTCCCATCGCCACCACGGATAC

SDM Mutagenesisa

F171G_FW

CCTGCCTAAAGGTGGTTATGCCGAAGGCTCCCG

SDM Mutagenesisa

F171G_RV

GTGGTACCCTGTGGCAGTTGCAG

SDM Mutagenesisa

  1. aSDM = site-directed mutagenesis using primers designed with NEBaseChanger® following the protocol described in the methods section.