Fig. 2: Engraftment is associated with expression of partial EMT signature. | Nature Communications

Fig. 2: Engraftment is associated with expression of partial EMT signature.

From: Molecular correlates for HPV-negative head and neck cancer engraftment prognosticate patient outcomes

Fig. 2

A Spearman’s correlation between protein and transcriptomic measurements. CPM: counts per million. B Spearman’s correlation between proteomic and transcriptomic log2(E/N) fold changes between Engrafter (E) and Non-engrafter (N) tumors. C Cytoscape enrichment map of significantly enriched pathways between E and N tumors. D Distributions of GSVA scores for the six meta-signatures identified by Puram et al. P-values are from two-sided Wilcoxon rank-sum tests (n = 51 E, 37 N). E Spearman’s correlation between proteomic and transcriptomic log2(E/N) fold changes for partial EMT signature proteins. All displayed p-values for correlations are from two-sided tests. Boxplots show the median and interquartile ranges. Source data are provided as a Source Data file.

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