Table 1 Model performance in assessing the effects of SVs on gene expression (Spearman R)
SV type | Number of SV-gene pair | SVEN | Enformer |
|---|---|---|---|
All | 94,366 (61,811) | 0.921 (0.907) | 0.841 (0.786) |
Insertion | 31,352 (20,360) | 0.921 (0.910) | 0.841 (0.785) |
MEI | 2109 (1401) | 0.928 (0.915) | 0.869 (0.810) |
Deletion | 36,450 (24,186) | 0.923 (0.905) | 0.844 (0.785) |
Duplication | 8671 (5805) | 0.923 (0.909) | 0.839 (0.792) |
Inversion duplication | 88 (62) | 0.923 (0.899) | 0.846 (0.794) |
Complex | 15,696 (9997) | 0.914 (0.903) | 0.831 (0.785) |
