Fig. 1: General analysis workflows of single-cell transcriptomic data and spatially resolved transcriptomic (SRT) data. | Nature Communications

Fig. 1: General analysis workflows of single-cell transcriptomic data and spatially resolved transcriptomic (SRT) data.

From: Categorization of 34 computational methods to detect spatially variable genes from spatially resolved transcriptomics data

Fig. 1

The left column shows a general analysis workflow for single-cell transcriptomic data with steps including highly variable gene (HVG) detection, cell clustering, and cluster-marker gene identification. The right column illustrates a workflow for analyzing SRT data with steps including spatially variable gene (SVG) detection, spatial domain identification, and domain-marker gene identification.

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