Fig. 4: Global and within supergene historical demography. | Nature Communications

Fig. 4: Global and within supergene historical demography.

From: Short-term evolutionary implications of an introgressed size-determining supergene in a vulnerable population

Fig. 4

PSMC computed using the whole genome data from two individuals representing the NEA (turquoise) and NWA (brown) regions (A) and within the chromosome 2 supergene in four individuals: HB/HB (Yellow), HB/HS (Red), HS/HS from the NWA (Blue), HS/HS from the NEA (Green) (B). Shaded areas represent the 95% confidence interval computed on 100 bootstraps replicates. The vertical dotted line in panel (A) represents TDIV (divergence between the NEA and the NWA) as estimated by fastsimcoal under IMM-5-NM-STOP model. Panel (C): Demographic model IMM-5-NM-STOP with maximum likelihood estimates for each parameter.

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