Table 1 Evaluation matrices for cell-wise binary label classification using mass cytometry data

From: Automated cytometric gating with human-level performance using bivariate segmentation

	UNITO				Static Gate
	Accuracy	Recall	Precision	F1	Accuracy	Recall	Precision	F1
Single cell gate 1	0.987	0.997	0.987	0.992	0.829	0.892	0.918	0.859
Single cell gate 2	0.975	0.993	0.976	0.984	0.813	0.823	0.875	0.827
Granulocyte gate	0.986	0.985	0.980	0.982	0.885	0.824	0.894	0.833
Mononuclear gate	0.990	0.982	0.975	0.977	0.932	0.788	0.840	0.789
Neutrophil gate	0.987	0.982	0.983	0.981	0.883	0.813	0.911	0.827
Eosinophil gate	0.998	0.863	0.772	0.790	0.995	0.632	0.602	0.516
T cell gate	0.994	0.984	0.990	0.973	0.957	0.785	0.832	0.792
B cell gate	0.998	0.972	0.959	0.963	0.993	0.779	0.826	0.780
Non-T-non-B cell gate	0.996	0.967	0.971	0.966	0.980	0.792	0.844	0.789
	FlowDensity				FlowSOM
	Accuracy	Recall	Precision	F1	Accuracy	Recall	Precision	F1
Single cell gate 1	0.845	0.901	0.928	0.903	0.935	0.946	0.976	0.960
Single cell gate 2	0.778	0.789	0.927	0.843	0.922	0.982	0.925	0.951
Granulocyte gate	0.800	0.604	0.923	0.705	0.950	0.967	0.925	0.944
Mononuclear gate	0.945	0.804	0.969	0.868	0.968	0.975	0.906	0.936
Neutrophil gate	0.641	0.251	0.918	0.354	0.956	0.993	0.919	0.953
Eosinophil gate	0.991	0.201	0.402	0.225	0.994	0.930	0.484	0.585
T cell gate	0.961	0.773	0.967	0.837	0.983	0.961	0.930	0.936
B cell gate	0.988	0.695	0.824	0.722	0.994	0.995	0.819	0.894
Non-T-non-B cell gate	0.978	0.684	0.949	0.767	0.989	0.979	0.874	0.921
	Logistic Regression				DeepCyTOF
	Accuracy	Recall	Precision	F1	Accuracy	Recall	Precision	F1
Single cell gate 1	0.951	0.973	0.969	0.970	0.839	0.974	0.859	0.904
Single cell gate 2	0.910	0.977	0.915	0.944	0.776	0.968	0.793	0.863
Granulocyte gate	0.937	0.985	0.899	0.938	0.768	0.971	0.692	0.789
Mononuclear gate	0.962	0.964	0.896	0.922	0.875	0.702	0.776	0.727
Neutrophil gate	0.938	0.991	0.893	0.937	0.758	0.972	0.677	0.776
Eosinophil gate	0.994	0.503	0.514	0.424	0.992	0	0	0
T cell gate	0.980	0.991	0.903	0.943	0.975	0.992	0.870	0.924
B cell gate	0.995	0.975	0.861	0.910	0.972	0	0	0
Non-T-non-B cell gate	0.983	0.878	0.888	0.863	0.915	0.279	0.363	0.289

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Table 1 Evaluation matrices for cell-wise binary label classification using mass cytometry data

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