Table 1 Clinical phenotypes of the four patients carrying the c.599G>A substitution in GNA13

From: A postzygotic GNA13 variant upregulates the RHOA/ROCK pathway and alters melanocyte function in a mosaic skin hypopigmentation syndrome

Patient

Patient 1

Patient 2

Patient 3

Patient 4

GNA13 Variant

Nomenclature

chr17:g.63010910C>T

NM_006572.4:c.599G>A

p.(Arg200Lys)

chr17:g.63010910C>T

NM_006572.4:c.599G>A

p.(Arg200Lys)

chr17:g.63010910C>T

NM_006572.4:c.599G>A

p.(Arg200Lys)

chr17:g.63010910C>T

NM_006572.4:c.599G>A

p.(Arg200Lys)

Tissue VAFa

Affected skin

29.0%

30.0%

25.0%

36%

Blood

0.3% (NS)

0.00% (NS)

0.0% (NS)

Buccal swab

0.1% (NS)

10.6%

3.9%

0.5% (NS)

Urine

0.0% (NS)

0.1% (NS)

0.0% (NS)

Sex

Male

Male

Female

Female

Age at last visit

14 y. 7 mo.

24 y.

22 mo.

9 y. 7 mo.

Growth

OFC (cm)

50.5 (−1 SD)

 

Height (cm)

108.5 (−0.5 SD)

123 (+0.5 SD)

 

Weight (kg)

19.0 (M)

22 (M)

Asymmetry

Craniofacial anomalies

Right-sided hemihypotrophy (lower limb)

Right-sided hemifacial hypoplasia

Lower limb asymmetry

Plagiocephaly

Scoliosis

No

Right-sided hemifacial hypoplasia

Pregnancy and birth

Fetal ultrasonography

Intrauterine growth retardation

Normal

Term

41 wk

39 wk

OFC at birth (cm)

NR

33.5

Length at birth (cm)

44.0

49.5

Weight at birth (g)

2500

3560

Skin and hair

Hypopigmentation pattern

Linear, spindle-shaped, flag-like, splash-like, phylloid

Linear, spindle-shaped

Linear, splash-like

Linear, spindle-shaped

Location of hypopigmentation

right upper and lower limbs, trunk

Lower limbs bilaterally, face (chin)

Left lower limb

Right upper limb

Hair anomalies

Absence of hair on hypopigmented skin

Patchy alopecia of scalp hair and right eyelashes

NR

Patchy alopecia on parietal scalp and right eyelashes

Wound healing

Delayed wound closure (9 months) after skin biopsy (right upper limb)

Delayed wound closure after skin biopsy (1 month) and after excision of supernumerary digit of the right hand (2–3 months)

NR

NR

Neurology

Peripheral nerves

Right foot dysaesthesia and weakness

NR

NR

NR

Brain MRI

White matter hyperintensities (centrum semiovale, right parietal lobe and temporoparietal junction, left frontal lobe)

Hydrocephalus

Normal (at age 6 mo.)

Not performed

Acral anomalies

Camptodactyly

Right hand polysyndactyly

Left hand brachymetacarpy

Bilateral pes planus (partial talocalcaneal fusion)

Toe syndactyly (right foot)

Left foot polysyndactyly

No

Ocular anomalies

No

Coloboma of upper eyelid, bilateral abnormal fundus

Mild iris coloboma

Amblyopia with mild microphalmia of right eye

Narrow palpebral fissure of right eye

Normal eye fundus

Dental anomalies

No

Odontogenic cysts, dental anomalies

NR

Conical teeth

Hearing loss

No

Mixed hypoacusis of right ear (hearing aid)

Otosclerosis

Abnormal inner auditory and cochlear nerve canals

Cochlear nerve agenesis or hypoplasia

Left ear hypoacusis

Chronic otitis media

No

Gastrointestinal tract anomalies

No

Jejunal atresia

Colonic atresia (ascending colon)

Colonic atresia

Urinary tract anomalies

No

Bilateral hydronephrosis, right megaureter

No

No

  1. VAF variant allele frequency, NR not reported, − missing data, NS not significant (below background noise threshold).
  2. aTargeted ultradeep sequencing (TUDS) on affected skin.