Fig. 2: GO enrichment analysis of WCS417 and GMI1000-induced DEGs from different cell types. | Nature Communications

Fig. 2: GO enrichment analysis of WCS417 and GMI1000-induced DEGs from different cell types.

From: Comparative single-nucleus RNA-seq analysis revealed localized and cell type-specific pathways governing root-microbiome interactions

Fig. 2

a Illustration of GO terms enriched both in WCS417 and GMI1000 triggered DEGs among different cell types. b GO terms mainly enriched in WCS417 upregulated genes in each cell type. c GO terms mainly enriched in GMI1000 upregulated genes in each cell type. The Y-axis represents the name of GO processes, while the X-axis shows different cell types. The color of the shape indicates the negative log10 (P-value) of GO terms. P-values were calculated using hypergeometric testing in the clusterProfiler package.

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