Fig. 2: Patterns of genetic diversity in fonio millets and wild relatives, with and without consideration of the D. exilis reference genome for calculations. | Nature Communications

Fig. 2: Patterns of genetic diversity in fonio millets and wild relatives, with and without consideration of the D. exilis reference genome for calculations.

From: Independent domestication and cultivation histories of two West African indigenous fonio millet crops

Fig. 2

a Boxplot distribution of nucleotide diversity (π) computed using sliding windows of size 50 kb and step sizes of 10 kb within D. exilis (n = 199), D. longiflora (n = 14), D. iburua (n = 21) and D. ternata (n = 11). b Boxplot distribution of the Jaccard dissimilarity index generated from the 1,000,000 k-mers presence/absence table and calculated within D. exilis (n = 199), D. longiflora (n = 13), D. iburua (n = 21) and D. ternata (n = 11). The centre line represents the median; the box limits represent the upper and lower quartiles; the upper and lower lines represent 1.5 times the interquartile range. Statistical comparisons between each pair of population are presented in Supplementary Table 2. Source data are provided as a Source Data file.

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