Fig. 8: Chem-circRNAs containing endocyclic cap engage in the cap-dependent translation. | Nature Communications

Fig. 8: Chem-circRNAs containing endocyclic cap engage in the cap-dependent translation.

From: Chemical circularization of in vitro transcribed RNA for exploring circular mRNA design

Fig. 8

A, B Show total protein output from circRNA₀₉ and linear (EP5Cap)RNA09 constructs in A549, HEK293T (HEK), HeLa, and HepG2 (HEP) cells transfected with circular RNAs derived from linear precursors bearing either a 5′ monophosphate (p-) [circ(p)RNA09] or an EP₅Cap structure [circ(EP5Cap)RNA09]. Protein expression was measured as secreted GLuc activity accumulated over 168 h and normalized to the level obtained with canonical Cap1-RNA₁₁ (=1). C Shows the time-course of GLuc expression in A549 cells transfected with circ(p)RNA₀₉, circ(EP₅Cap)RNA₀₉, respective linear precursors, and linear Cap1-RNA11. D Shows in vitro translation of circ(p)RNA₀₉, circ(EP₅Cap)RNA₀₉, and circ(p)RNA₁₅ in rabbit reticulocyte lysate (RRL) in the presence of the cap-dependent translation inhibitor (m7GpsppG), demonstrating inhibition of translation and supporting a cap-dependent translation mechanism40,41. Chem-circ RNAs containing N1-methylpseudouridine can be translationally active (EH). Cells were transfected with circ(EP5Cap)RNA09 (Cap), circ(p)RNA15 (EMCV), Cap1-RNA11, and their respective counterparts containing N1-methylpeudouridine (+m1Ψ). E Shows the time-course of GLuc expression from circRNAs (circ(EP5Cap)RNA09 and circ(p)RNA15) and linear Cap1-RNA11 over 168 h in A549 cells. FH Show the total protein output from four cell lines (A549, HeLa, HEK, HepG2) transfected with circ(EP5Cap)RNA09/circ(EP5Cap)RNA09 + m1Ψ (F), circ(p)RNA15/circ(p)RNA15 + m1Ψ (G), linear Cap1-RNA₁₁/Cap1-RNA₁₁ + m1Ψ (H), harvested at 168 h post-transfection. In each FH, values are normalized to the signal from the corresponding uridine-containing mRNA. A, B, F, G, H Data represent mean ± SD of three biological replicates (n = 3), P values were calculated using unpaired Student’s t test. Source data are provided as a Source Data file.

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