Fig. 3: Evaluation of split site 98-99. | Nature Communications

Fig. 3: Evaluation of split site 98-99.

From: Design and evaluation of a tripartite chemogenetic fluorescent reporter for visualizing ternary protein complexes

Fig. 3

a Model for complementation of bipartite split-FAST and equations relating effective fluorogen concentration for half maximal complementation in the absence of interaction (EC50,–interaction) and in the presence of interaction (EC50,+interaction) to the efficacy of the self-complementation and of the interaction-dependent complementation. b–e Normalized average fluorescence of about 20,000 HEK293T cells co-expressing the FK506-binding protein (FKBP) fused to the N-terminus of FAST99–125 (b, c) or RspAFAST99-125 (d, e) and the FKBP-rapamycin-binding domain of mammalian target of rapamycin (FRB) fused to the C-terminus of FAST1–98 (b, c) or RspAFAST1–98 (d, e) treated without or with 500 nM of rapamycin, and with 0, 1, 5, 10, 25 or 50 μM of HMBR. Data in c,e represent the mean ± SD of three independent experiments. f–h HEK293T cells expressing RspAFAST1–98-FRB and FKBP-RspAFAST99-125 were treated with 10 μM HMBR. Cells were imaged after the addition of 500 nM of rapamycin. Experiments were repeated two times with similar results. f Representative micrographs before and after addition of rapamycin (see also Supplementary Movie 1). Scale bars 20 μm. g Temporal evolution of the fluorescence signal (F/Fmax) after addition of rapamycin n = 33 cells from two independent experiments. F is the fluorescence intensity at time t, and Fmax is the maximal fluorescence intensity reached during the time-lapse. h Fluorescence fold increase (Fmax/Fmin) upon addition of rapamycin. Fmin is the fluorescence intensity at time t = 0, and Fmax is the maximal fluorescence intensity reached during the time-lapse. g, h Each cell is color-coded according to the biological replicate it came from. g The dot lines represent the mean value of each biological replicate, while the black line represents the mean of the two biological replicates. h The solid circles correspond to the mean of each biological replicate. The black line represents the mean ± SD of the two biological replicates. Source data are provided as a Source Data file.

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