Fig. 3: The pan-genome of Aspergillus flavus is closed and contains 17,676 orthogroups.
From: Population structure in a fungal human pathogen is potentially linked to pathogenicity
A Rarefaction curve of number of orthogroups added with each additional genome, excluding singletons. Data are presented as mean of 100 permutations with random ordering of genomes added with standard deviation indicated. B Histogram of orthogroup frequency determined by number of genomes in which each orthogroups is present. The core genome contains 10,161 orthogroups. The accessory genome of A. flavus contains 7515 orthogroups. C Heatmap of normalized abundance of gene ontology (GO) annotations with significant differences in abundance among populations. Significance determined by one-way ANOVA. Bonferroni-corrected, p < 0.05. The bar chart shows the mean number of genes containing each GO term across all genomes. Source data in the form of predicted proteomes are provided in the associated Figshare repository and Supplemental Data 6.
