Table 1 Summary statistics of 10 rice genomes
Accession | Genome size (bp) | Contig N50 (Mb) | Telomere number | Centromere number | Completeness (BUSCO) | LAI | QV | Gene number |
|---|---|---|---|---|---|---|---|---|
KOGONI | 391,943,762 | 11 | 12 | 12 | 98.70% | 24.27 | 35.4 | 33553 |
Koshihikari | 373,101,744 | 9 | 13 | 12 | 98.60% | 21.41 | 34.8 | 28878 |
Lemont | 379,430,320 | 25 | 12 | 12 | 98.60% | 22.32 | 35.3 | 29369 |
MADINIKA | 392,020,413 | 21 | 13 | 12 | 98.80% | 24.22 | 35.7 | 32761 |
Nanjing11 | 392,195,977 | 16 | 9 | 12 | 98.60% | 25.14 | 35.3 | 33024 |
NONA_BOKRA | 386,246,295 | 15 | 14 | 11 | 98.50% | 23.58 | 35.6 | 32382 |
Nipponbare | 374,980,003 | 15 | 9 | 12 | 98.70% | 21.43 | 35 | 28936 |
Fujisaka5 | 375,578,160 | 21 | 17 | 12 | 98.80% | 21.67 | 35.6 | 29124 |
TEQING | 390,364,816 | 14 | 13 | 12 | 98.70% | 23.96 | 34.9 | 33196 |
9311 | 393,694,398 | 16 | 14 | 12 | 98.60% | 24.02 | 34.8 | 33690 |
