Fig. 3: Benchmarking performance on the NanoString CosMx SMI dataset.
From: SpaIM: single-cell spatial transcriptomics imputation via style transfer
a Benchmarking results on the Lung9–rep1 dataset, using evaluation metrics including structural similarity index measure (SSIM) and Jaccard similarity (JS). Data are presented as mean values ± 95% confidence intervals across predicted genes (\(n\) = 2038). b Spatial visualization of cell types in the Lung9-rep1 dataset. c Comparisons of the number of differentially expressed genes in each cell type. d Spatial visualization of ground truth and the predicted expressions of tumor-related genes.
