Fig. 4: Kinetic solvent viscosity effects. | Nature Communications

Fig. 4: Kinetic solvent viscosity effects.

From: Distal mutations enhance catalysis in designed enzymes by facilitating substrate binding and product release

Fig. 4

a Kemp elimination reaction scheme. be Gray and black lines correspond to Core and Evolved variants, respectively. Kinetic solvent viscosity effects on kcat/KM for b HG3, c 1A53, and d KE70 variants show a linear dependence on relative viscosity (ηrel). The slope (m) corresponds to k3/(k2 + k3), where k2 is the rate constant of substrate dissociation and k3 is the rate constant for the chemical transformation. A slope of 1 indicates that k3 is at least 100-fold larger than k2 (m = k3/k3). A slope of 0 indicates that k3 is much smaller than k2 (m = k3/k2 = 0). e Kinetic solvent viscosity effects on kcat for KE70-Evolved show an inverse hyperbolic pattern, which is consistent with the presence of a solvent-sensitive internal isomerization of the enzyme-product complex. Data represent the average of 6 individual replicates from 2 independent protein batches, with error bars reporting the SEM. Source data are provided as a Source data file.

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