Fig. 4: PSM, peptide, and protein identification results at 1% FDR on the Marine3, Soil3, P3, and human gut datasets, using four metaproteomics pipelines with either default filters or WinnowNet as an alternative filter.
From: Enhancing peptide identification in metaproteomics through curriculum learning in deep learning
SE denotes Sipros-Ensemble, R refers to the default filters used in the pipelines, and Win represents the self-attention-based WinnowNet method.
