Abstract
Animals integrate internal states to guide survival-critical decisions, but whether and how intestinal bacteria influence this process by interacting with host metabolic cues remains unclear. Here we show that the intestinal pathogen P. aeruginosa overrides host decision-making in fasted C. elegans by modulating central serotonin (5-HT) signaling. Fasting promotes risk-taking by activating an intestinal energy-sensing pathway that induces the chemoreceptor SRI-36 in ADF 5-HT neurons, sensitizing ADF to food odors and triggering moderate 5-HT release that drives food attraction despite risk. In contrast, intestinal P. aeruginosa reverses this strategy by activating a distinct immune-brain axis that further amplifies SRI-36 expression and ADF sensitivity, leading to excessive 5-HT release that suppresses food attraction and prioritizes safety. These findings reveal a gut-to-brain mechanism by which metabolic and immune signals converge on central 5-HT to reshape behavioral strategies.
Data availability
All data generated or analyzed during this study are included in this published article and its supplementary information files. Source data are provided with this paper.
References
Stein, B. E., Stanford, T. R. & Rowland, B. A. Development of multisensory integration from the perspective of the individual neuron. Nat. Rev. Neurosci. 15, 520–535 (2014).
Hu, H. Reward and aversion. Annu. Rev. Neurosci. 39, 297–324 (2016).
Liu, L. et al. Eating to dare - nutrition impacts human risky decision and related brain function. Neuroimage 233, 117951 (2021).
Padilla, S. L. et al. Agouti-related peptide neural circuits mediate adaptive behaviors in the starved state. Nat. Neurosci. 19, 734–741 (2016).
Inagaki, H. K., Panse, K. M. & Anderson, D. J. Independent, reciprocal neuromodulatory control of sweet and bitter taste sensitivity during starvation in Drosophila. Neuron 84, 806–820 (2014).
Ghosh, D. D. et al. Neural architecture of hunger-dependent multisensory decision making in C. elegans. Neuron 92, 1049–1062 (2016).
Root, C. M., Ko, K. I., Jafari, A. & Wang, J. W. Presynaptic facilitation by neuropeptide signaling mediates odor-driven food search. Cell 145, 133–144 (2011).
Wexler, L. R., Miller, R. M. & Portman, D. S. C. elegans males integrate food signals and biological sex to modulate state-dependent chemosensation and behavioral prioritization. Curr. Biol. 30, 2695–2706.e2694 (2020).
Sengupta, P. The belly rules the nose: feeding state-dependent modulation of peripheral chemosensory responses. Curr. Opin. Neurobiol. 23, 68–75 (2013).
Pedersen, A., Göder, R., Tomczyk, S. & Ohrmann, P. Risky decision-making under risk in schizophrenia: a deliberate choice?. J. Behav. Ther. Exp. Psychiatry 56, 57–64 (2017).
Thye, M. D., Bednarz, H. M., Herringshaw, A. J., Sartin, E. B. & Kana, R. K. The impact of atypical sensory processing on social impairments in autism spectrum disorder. Dev. Cogn. Neurosci. 29, 151–167 (2018).
Cryan, J. F. & Dinan, T. G. Mind-altering microorganisms: the impact of the gut microbiota on brain and behaviour. Nat. Rev. Neurosci. 13, 701–712 (2012).
Nagpal, J. & Cryan, J. F. Microbiota-brain interactions: moving toward mechanisms in model organisms. Neuron https://doi.org/10.1016/j.neuron.2021.09.036 (2021).
Dantzer, R., O’Connor, J. C., Freund, G. G., Johnson, R. W. & Kelley, K. W. From inflammation to sickness and depression: when the immune system subjugates the brain. Nat. Rev. Neurosci. 9, 46–56 (2008).
Perry, V. H., Cunningham, C. & Holmes, C. Systemic infections and inflammation affect chronic neurodegeneration. Nat. Rev. Immunol. 7, 161–167 (2007).
Der-Avakian, A. & Markou, A. The neurobiology of anhedonia and other reward-related deficits. Trends Neurosci. 35, 68–77 (2012).
Kang, W. K. et al. Vitamin B(12) produced by gut bacteria modulates cholinergic signalling. Nat. Cell Biol. https://doi.org/10.1038/s41556-023-01299-2 (2024).
Fülling, C., Dinan, T. G. & Cryan, J. F. Gut microbe to brain signaling: what happens in Vagus. Neuron 101, 998–1002 (2019).
Zhang, J., Holdorf, A. D. & Walhout, A. J. M. C. elegans and its bacterial diet as a model for systems-level understanding of host–microbiota interactions. Curr. Opin. Biotechnol. 46, 74–80 (2017).
Kim, D. H. & Flavell, S. W. Host-microbe interactions and the behavior of Caenorhabditis elegans. J. Neurogenet. 34, 500–509 (2020).
Matty, M. A. & Chalasani, S. H. Microbial mind control. Cell Host Microbe 28, 147–149 (2020).
Faumont, S., Lindsay, T. H. & Lockery, S. R. Neuronal microcircuits for decision making in C. elegans. Curr. Opin. Neurobiol. 22, 580–591 (2012).
Liu, P., Chen, B. & Wang, Z. W. GABAergic motor neurons bias locomotor decision-making in C. elegans. Nat. Commun. 11, 5076 (2020).
Matty, M. A. et al. Intestine-to-neuronal signaling alters risk-taking behaviors in food-deprived Caenorhabditis elegans. PLoS Genet. 18, e1010178 (2022).
Hilliard, M. A. et al. In vivo imaging of C. elegans ASH neurons: cellular response and adaptation to chemical repellents. EMBO J. 24, 63–72 (2005).
Metaxakis, A., Petratou, D. & Tavernarakis, N. Multimodal sensory processing in Caenorhabditis elegans. Open Biol. https://doi.org/10.1098/rsob.180049 (2018).
Meisel, J. D., Panda, O., Mahanti, P., Schroeder, F. C. & Kim, D. H. Chemosensation of bacterial secondary metabolites modulates neuroendocrine signaling and behavior of C. elegans. Cell 159, 267–280 (2014).
Ha, H. I. et al. Functional organization of a neural network for aversive olfactory learning in Caenorhabditis elegans. Neuron 68, 1173–1186 (2010).
Wu, T. et al. Pathogenic bacteria modulate pheromone response to promote mating. Nature https://doi.org/10.1038/s41586-022-05561-9 (2023).
Fuhrman, L. E., Goel, A. K., Smith, J., Shianna, K. V. & Aballay, A. Nucleolar proteins suppress Caenorhabditis elegans innate immunity by inhibiting p53/CEP-1. PLoS Genet. 5, e1000657 (2009).
Bang, D. et al. Sub-second dopamine and serotonin signaling in human striatum during perceptual decision-making. Neuron 108, 999–1010.e1016 (2020).
Chase, D. L. & Koelle, M. R. Biogenic amine neurotransmitters in C. elegans. WormBook https://doi.org/10.1895/wormbook.1.132.1 (2007).
Ranganathan, R., Sawin, E. R., Trent, C. & Horvitz, H. R. Mutations in the Caenorhabditis elegans serotonin reuptake transporter MOD-5 reveal serotonin-dependent and -independent activities of fluoxetine. J. Neurosci. 21, 5871–5884 (2001).
Sze, J. Y., Victor, M., Loer, C., Shi, Y. & Ruvkun, G. Food and metabolic signalling defects in a Caenorhabditis elegans serotonin-synthesis mutant. Nature 403, 560–564 (2000).
Pokala, N., Liu, Q., Gordus, A. & Bargmann, C. I. Inducible and titratable silencing of Caenorhabditis elegans neurons in vivo with histamine-gated chloride channels. Proc. Natl. Acad. Sci. USA 111, 2770–2775 (2014).
Pereira, L. et al. A cellular and regulatory map of the cholinergic nervous system of C. elegans. eLife https://doi.org/10.7554/eLife.12432 (2015).
Rand, J. B. Acetylcholine. WormBook https://doi.org/10.1895/wormbook.1.131.1 (2007).
Cook, S. J. et al. Whole-animal connectomes of both Caenorhabditis elegans sexes. Nature 571, 63–71 (2019).
Shao, J. et al. Serotonergic neuron ADF modulates avoidance behaviors by inhibiting sensory neurons in C. elegans. Pflugers Arch. 471, 357–363 (2019).
Zhang, B., Jun, H., Wu, J., Liu, J. & Xu, X. Z. S. Olfactory perception of food abundance regulates dietary restriction-mediated longevity via a brain-to-gut signal. Nat. Aging 1, 255–268 (2021).
Richmond, J. E., Davis, W. S. & Jorgensen, E. M. UNC-13 is required for synaptic vesicle fusion in C. elegans. Nat. Neurosci. 2, 959–964 (1999).
Speese, S. et al. UNC-31 (CAPS) is required for dense-core vesicle but not synaptic vesicle exocytosis in Caenorhabditis elegans. J. Neurosci. 27, 6150–6162 (2007).
Cornell, R., Cao, W., Liu, J. & Pocock, R. Conditional degradation of UNC-31/CAPS enables spatiotemporal analysis of neuropeptide function. J. Neurosci. 42, 8599–8607 (2022).
Sengupta, P., Colbert, H. A. & Bargmann, C. I. The C. elegans gene odr-7 encodes an olfactory-specific member of the nuclear receptor superfamily. Cell 79, 971–980 (1994).
Bargmann, C. I. Chemosensation in C. elegans. WormBook https://doi.org/10.1895/wormbook.1.123.1 (2006).
Robertson, H. M. & Thomas, J. H. The putative chemoreceptor families of C. elegans. WormBook https://doi.org/10.1895/wormbook.1.66.1 (2006).
McLachlan, I. G. et al. Diverse states and stimuli tune olfactory receptor expression levels to modulate food-seeking behavior. eLife https://doi.org/10.7554/eLife.79557 (2022).
Liu, J. et al. GABAergic signaling between enteric neurons and intestinal smooth muscle promotes innate immunity and gut defense in Caenorhabditis elegans. Immunity 56, 1515–1532.e1519 (2023).
Gong, J. et al. A cold-sensing receptor encoded by a glutamate receptor gene. Cell 178, 1375–1386.e1311 (2019).
González, A., Hall, M. N., Lin, S. C. & Hardie, D. G. AMPK and TOR: the Yin and Yang of cellular nutrient sensing and growth control. Cell Metab. 31, 472–492 (2020).
Greer, E. L. et al. An AMPK-FOXO pathway mediates longevity induced by a novel method of dietary restriction in C. elegans. Curr. Biol. 17, 1646–1656 (2007).
Lin, K., Hsin, H., Libina, N. & Kenyon, C. Regulation of the Caenorhabditis elegans longevity protein DAF-16 by insulin/IGF-1 and germline signaling. Nat. Genet. 28, 139–145 (2001).
Winston, W. M., Molodowitch, C. & Hunter, C. P. Systemic RNAi in C. elegans requires the putative transmembrane protein SID-1. Science 295, 2456–2459 (2002).
Evans, E. A., Kawli, T. & Tan, M. W. Pseudomonas aeruginosa suppresses host immunity by activating the DAF-2 insulin-like signaling pathway in Caenorhabditis elegans. PLoS Pathog. 4, e1000175 (2008).
Li, G., Gong, J., Lei, H., Liu, J. & Xu, X. Z. Promotion of behavior and neuronal function by reactive oxygen species in C. elegans. Nat. Commun. 7, 13234 (2016).
Lee, K. & Mylonakis, E. An intestine-derived neuropeptide controls avoidance behavior in Caenorhabditis elegans. Cell Rep. 20, 2501–2512 (2017).
Li, C. & Kim, K. Neuropeptides. WormBook https://doi.org/10.1895/wormbook.1.142.1 (2008).
De Rosa, M. J. et al. The flight response impairs cytoprotective mechanisms by activating the insulin pathway. Nature 573, 135–138 (2019).
Murphy, C. T. & Hu, P. J. Insulin/insulin-like growth factor signaling in C. elegans. WormBook https://doi.org/10.1895/wormbook.1.164.1 (2013).
Tepper, R. G. et al. PQM-1 complements DAF-16 as a key transcriptional regulator of DAF-2-mediated development and longevity. Cell 154, 676–690 (2013).
Ezcurra, M., Walker, D. S., Beets, I., Swoboda, P. & Schafer, W. R. Neuropeptidergic signaling and active feeding state inhibit nociception in Caenorhabditis elegans. J. Neurosci. 36, 3157–3169 (2016).
Dag, U. et al. Dissecting the functional organization of the C. elegans serotonergic system at whole-brain scale. Cell https://doi.org/10.1016/j.cell.2023.04.023 (2023).
Miesenböck, G., De Angelis, D. A. & Rothman, J. E. Visualizing secretion and synaptic transmission with pH-sensitive green fluorescent proteins. Nature 394, 192–195 (1998).
Tobin, D. M. et al. Combinatorial expression of TRPV channel proteins defines their sensory functions and subcellular localization in C. elegans Neurons. Neuron 35, 307–318 (2002).
Singh, A. & Luallen, R. J. Understanding the factors regulating host-microbiome interactions using Caenorhabditis elegans. Philos. Trans. R. Soc. Lond. B Biol. Sci. 379, 20230059 (2024).
Almoril-Porras, A. et al. Configuration of electrical synapses filters sensory information to drive behavioral choices. Cell 188, 89–103.e113 (2025).
Grunwald Kadow, I. C. State-dependent plasticity of innate behavior in fruit flies. Curr. Opin. Neurobiol. 54, 60–65 (2019).
Sawin, E. R., Ranganathan, R. & Horvitz, H. R. C. elegans locomotory rate is modulated by the environment through a dopaminergic pathway and by experience through a serotonergic pathway. Neuron 26, 619–631 (2000).
Flavell, S. tevenW. et al. Serotonin and the neuropeptide PDF initiate and extend opposing behavioral states in C. elegans. Cell 154, 1023–1035 (2013).
Liu, Z. et al. Dorsal raphe neurons signal reward through 5-HT and glutamate. Neuron 81, 1360–1374 (2014).
Homberg, J. R. Serotonin and decision making processes. Neurosci. Biobehav. Rev. 36, 218–236 (2012).
Seymour, B., Daw, N. D., Roiser, J. P., Dayan, P. & Dolan, R. Serotonin selectively modulates reward value in human decision-making. J. Neurosci. 32, 5833–5842 (2012).
Pollak Dorocic, I. et al. A whole-brain atlas of inputs to serotonergic neurons of the dorsal and median raphe nuclei. Neuron 83, 663–678 (2014).
Fonseca, M. S., Murakami, M. & Mainen, Z. F. Activation of dorsal raphe serotonergic neurons promotes waiting but is not reinforcing. Curr. Biol. 25, 306–315 (2015).
Li, Y. et al. Serotonin neurons in the dorsal raphe nucleus encode reward signals. Nat. Commun. 7, 10503 (2016).
Cohen, J. Y., Amoroso, M. W. & Uchida, N. Serotonergic neurons signal reward and punishment on multiple timescales. eLife https://doi.org/10.7554/eLife.06346 (2015).
Price, J., Cole, V. & Goodwin, G. M. Emotional side-effects of selective serotonin reuptake inhibitors: qualitative study. Br. J. Psychiatry 195, 211–217 (2009).
Okaty, B. W., Commons, K. G. & Dymecki, S. M. Embracing diversity in the 5-HT neuronal system. Nat. Rev. Neurosci. 20, 397–424 (2019).
Gruner, M. et al. Cell-Autonomous and non-cell-autonomous regulation of a feeding state-dependent chemoreceptor gene via MEF-2 and bHLH transcription factors. PLoS Genet. 12, e1006237 (2016).
van der Linden, A. M., Nolan, K. M. & Sengupta, P. KIN-29 SIK regulates chemoreceptor gene expression via an MEF2 transcription factor and a class II HDAC. EMBO J. 26, 358–370 (2007).
Kyani-Rogers, T. et al. Developmental history modulates adult olfactory behavioral preferences via regulation of chemoreceptor expression in Caenorhabditis elegans. Genetics https://doi.org/10.1093/genetics/iyac143 (2022).
Riera, C. E. et al. The sense of smell impacts metabolic health and obesity. Cell Metab. 26, 198–211.e195 (2017).
Fernandez, A. M. & Torres-Alemán, I. The many faces of insulin-like peptide signalling in the brain. Nat. Rev. Neurosci. 13, 225–239 (2012).
Wu, Q., Zhao, Z. & Shen, P. Regulation of aversion to noxious food by Drosophila neuropeptide Y- and insulin-like systems. Nat. Neurosci. 8, 1350–1355 (2005).
Kaelberer, M. M., Rupprecht, L. E., Liu, W. W., Weng, P. & Bohórquez, D. V. Neuropod cells: the emerging biology of gut-brain sensory transduction. Annu. Rev. Neurosci. 43, 337–353 (2020).
Lee, Y. S. et al. Insulin-like peptide 5 is a microbially regulated peptide that promotes hepatic glucose production. Mol. Metab. 5, 263–270 (2016).
Ravikumar, S., Devanapally, S. & Jose, A. M. Gene silencing by double-stranded RNA from C. elegans neurons reveals functional mosaicism of RNA interference. Nucleic Acids Res. 47, 10059–10071 (2019).
Powell, J. R. & Ausubel, F. M. in Innate Immunity (eds Ewbank, J. & Vivier, E.) 403–427 (Humana Press, 2008).
Anyanful, A., Easley, K. A., Benian, G. M. & Kalman, D. Conditioning protects C. elegans from lethal effects of enteropathogenic E. coli by activating genes that regulate lifespan and innate immunity. Cell Host Microbe 5, 450–462 (2009).
Cunningham, K. A. et al. AMP-activated kinase links serotonergic signaling to glutamate release for regulation of feeding behavior in C. elegans. Cell Metab. 16, 113–121 (2012).
Yue, X. M. et al. TMC proteins modulate egg laying and membrane excitability through a background leak conductance in C. elegans. Neuron 97, 571–585 (2018).
Li, Z., Liu, J., Zheng, M. & Xu, X. Z. Encoding of both analog- and digital-like behavioral outputs by one C. elegans interneuron. Cell 159, 751–765 (2014).
Noble, T., Stieglitz, J. & Srinivasan, S. An integrated serotonin and octopamine neuronal circuit directs the release of an endocrine signal to control C. elegans body fat. Cell Metab. 18, 672–684 (2013).
Zhan, X. et al. Locomotion modulates olfactory learning through proprioception in C. elegans. Nat. Commun. 14, 4534 (2023).
Liu, Q., Kidd, P. B., Dobosiewicz, M. & Bargmann, C. I. C. elegans AWA olfactory neurons fire calcium-mediated all-or-none action potentials. Cell 175, 57–70.e17 (2018).
Timmons, L. & Fire, A. Specific interference by ingested dsRNA. Nature 395, 854 (1998).
Pu, X. & Qi, B. Lysosomal dysfunction by inactivation of V-ATPase drives innate immune response in C. elegans. Cell Rep. 43, 114138 (2024).
Acknowledgements
We would like to thank Jianke Gong, Bin Qi, Anbing Shi, and Taihong Wu for providing bacterial strains; Jianke Gong, Long Lin, Anbing Shi, Haijun Tu, Wenxing Yang, and Donglei Zhang for plasmids; and Cornelia I. Bargmann, Jianke Gong, Long Lin, and Yun Zhang for C. elegans strains. We also acknowledge the Caenorhabditis Genetics Center (USA), which is funded by NIH Office of Research Infrastructure Programs (P40OD010440), for providing E. coli OP50 and C. elegans strains. This work was supported by grants from the National Natural Science Foundation of China (32571188 and 32171003 to P.L.) and the Interdisciplinary Research Program of HUST (5003170102 to P.L.).
Author information
Authors and Affiliations
Contributions
Y.L., C.C., and P.L. conceived and initiated the study. Y.L. and P.L. designed the experiments. Y.L., X.Z., M.X., Y.W., H.L., and J.Z. performed the experiments and analyzed the data. Y.L. and P.L. interpreted the results. P.L. wrote the manuscript.
Corresponding author
Ethics declarations
Competing interests
The authors declare no competing interests.
Peer review
Peer review information
Nature Communications thanks the anonymous reviewer(s) for their contribution to the peer review of this work. A peer review file is available
Additional information
Publisher’s note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Supplementary information
Rights and permissions
Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
About this article
Cite this article
Lei, Y., Chen, C., Zhan, X. et al. Intestinal pathogens override hunger-driven decision-making via immune regulation of central serotonin signaling in C. elegans. Nat Commun (2026). https://doi.org/10.1038/s41467-026-69924-w
Received:
Accepted:
Published:
DOI: https://doi.org/10.1038/s41467-026-69924-w