Table 1 The gene and TE distribution on the seven chromosomes of the Ae. tauschii genome
From: The Aegilops tauschii genome reveals multiple impacts of transposons
Chr | Length (Mb) | Genetic length (cM) | Centromere region length (Mb) | Gene counts | Gene density (No. gene/Mb) | Pseudogene counts | TE length (Mb) | LTR length (Mb) | Gypsy length (Mb) | Copia length (Mb) | TE-DNA length (Mb) |
|---|---|---|---|---|---|---|---|---|---|---|---|
Chr1 | 508.57 | 144.98 | 76 | 5,356 | 10.5 | 3,097 | 441.37 | 300.21 | 198.19 | 85.87 | 97.02 |
Chr2 | 632.94 | 182.96 | 136 | 6,939 | 11.0 | 3,856 | 548.60 | 371.10 | 246.78 | 103.40 | 122.73 |
Chr3 | 627.29 | 169.00 | 82 | 6,129 | 9.8 | 3,867 | 545.32 | 373.41 | 250.44 | 103.68 | 119.30 |
Chr4 | 530.31 | 120.14 | 106 | 4,807 | 9.1 | 3,140 | 471.32 | 331.69 | 231.23 | 83.70 | 96.29 |
Chr5 | 570.43 | 214.49 | 82 | 6,645 | 11.6 | 3,375 | 491.64 | 341.21 | 219.62 | 104.54 | 100.35 |
Chr6 | 497.16 | 135.95 | 125 | 5,179 | 10.4 | 3,092 | 433.32 | 297.43 | 198.33 | 83.45 | 93.48 |
Chr7 | 639.09 | 186.06 | 171 | 6,900 | 10.8 | 4,108 | 548.69 | 364.43 | 241.72 | 103.09 | 128.35 |
Chr0 | 328.57 | NA | NA | 873 | 2.7 | 1,358 | 217.28 | 113.47 | 62.37 | 43.78 | 83.86 |
Total | 4,334.36 | 1,153.58 | 778 | 42,828 | 9.9 | 25,893 | 3,697.54 | 2,492.95 | 1,648.68 | 711.51 | 841.38 |
