Extended Data Fig. 8: Expression analysis of putative antimicrobial effector gene candidates.
From: Microbiome manipulation by a soil-borne fungal plant pathogen using effector proteins
Expression profiles of ten putative antimicrobial effector gene candidates with three previously characterized lineage-specific in planta-induced effectors (VdAve1, XLOC_008951, XLOC_009059) during host colonization in A. thaliana, N. benthamiana, G. hirsutum (cotton) and in vitro growth in potato dextrose broth (PDB), 0.5x MS (Murashige and Skoog) medium and Czapek Dox in the presence and absence of peptidoglycan, B. subtilis, E. coli and T. viride17,20,27,28. The log-scaled colour gradient indicates gene expression in Transcripts Per Million (TPM), grey boxes indicate absence of the lineage specific effector genes in V. dahliae strain CQ2 that was used for cotton infection. All the other expression profiles were generated using V. dahliae strain JR2.
