Extended Data Fig. 2: Overview of quality metrics of generated RNA-seq and proteome data.
From: Integrated multi-omics framework of the plant response to jasmonic acid
a,b, Multidimensional scaling (MDS) plots of replicate samples of the 24 h JA treatment RNA-seq time-series in WT (a) and the 4 h JA-treatment RNA-seq time-series in WT and myc2 seedlings (b) are shown. Both JA treatment time series consist of three independent samples (n = 3) for each time point and genotype. c, d, Principal component analysis (PCA) plots of independent biological replicate samples analyzed by proteomics (c) and phosphoproteomics (d).
