Extended Data Fig. 3: MYC2 and MYC3 act predominantly as activators for a functionally diverse range of target genes.
From: Integrated multi-omics framework of the plant response to jasmonic acid
a,b, Gene ontology (GO) analyses using a hypergeometric distribution of all MYC2 and MYC3 targets (a) as well as MYC2 only and MYC2/MYC3 shared targets (b) are shown. Data is derived from four independent MYC2 (n = 4) and three independent MYC3 (n = 3) ChIP-seq samples. Analyses were conducted using clusterProfiler. c, Bar plots shows the portion of JA-induced and JA-repressed genes that are bound by MYC2 and MYC3. d, e, The CACG[A/C]G motif (286 sites, E = 2*10−52) (d) and the AT[A/T][A/T] [A/T]ATA motif (714 sites, E = 8.9*10−35) (e) were enriched in MYC2 high-confidence target regions that do not contain a G-box or the degenerate G-box motifs CATGTG or CACGTT.
