Extended Data Fig. 9: A subset of flg22-induced genes is downregulated by SynComs.
From: Coordination of microbe–host homeostasis by crosstalk with plant innate immunity
a, Pairwise comparison of Jaccard similarity between clusters from two root transcriptome studies (this study: 10 clusters by row; and 8 clusters by column: Teixeira et al., 2021 (ref. 31)). Significantly enriched GO terms associated with cluster 1 (b; root development related) and cluster 3 (c; defense related) showing highest similarity between studies were shown. 58 common DEGs were downregulated by SynComs across these two studies, and 21 out of 44 GO annotated DEGs shown in (c) were defense-related. Defense-related GOs were highlighted by a star. Numbers in parentheses indicate the total number of DEGs with GO annotations.
