Extended Data Fig. 9: Homology, filler, and T-DNA loss profiles for tdp2 mutant.
From: Distinct mechanisms for genomic attachment of the 5′ and 3′ ends of Agrobacterium T-DNA in plants
Frequency of different lengths of microhomology (a, b), filler (c, d), or T-DNA loss (e, f) at RB and LB junctions, comparing wt (yellow) with the tdp2 mutant (cyan). The overlapping area is indicated in turquoise. The medians (dashed lines), the number of observations (n), and shifts in the mutant distribution relative to wt (s) are indicated. Wilcoxon rank-sum tests were performed to find the direction (one-sided tests) and the significance of the shifts (two-sided tests, phomology_RB = 7 × 10−11, phomology_LB = 2 × 10−1, pfiller_RB = 3 × 10−2, pfiller_LB = 7 × 10−1, pdeletion_RB = 2 × 10−24, pdeletion_LB = 6 × 10−2). ns: p ≥ 0.05, *: p < 0.05, **: p < 0.01, ***: p < 0.001.
