Extended Data Fig. 3: Identification of receptor gene families in 350 plant genomes. | Nature Plants

Extended Data Fig. 3: Identification of receptor gene families in 350 plant genomes.

From: Concerted expansion and contraction of immune receptor gene repertoires in plant genomes

Extended Data Fig. 3

Protein sequences from all 350 proteomes were first filtered for the primary gene models. Primary-transcript proteomes were then filtered and NB-ARC, LRR-RLP, LysM-RLK, LysM-RLP and LRR-RLK proteins were identified. LRR-RLK genes were further classified into 20 subgroups according to their alignment to the Arabidopsis thaliana subgroups. Details of the pipeline are described in the methods section.

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