Table 1 Metagenomic community state types identified in the dataset
mgCST | Frequent mgSs (prevalence) | Abundant mgSs | Samples |
|---|---|---|---|
mgCST 4 | Lactobacillus crispatus 4 | Lactobacillus crispatus 4 | 85 |
mgCST 1 | Lactobacillus crispatus 1 | Lactobacillus crispatus 1 | 65 |
mgCST 10 | Lactobacillus iners 1 | Lactobacillus iners 1 | 35 |
mgCST 16 | Lactobacillus jensenii 2 | Lactobacillus jensenii 2 | 35 |
mgCST 27 | Bifidobacterium dentium | Enterococcus faecalis 3 | 18 |
mgCST 8 | Lactobacillus gasseri 2 | Lactobacillus gasseri 2 | 14 |
mgCST 26 | Bifidobacterium breve | Bifidobacterium breve | 13 |
mgCST 9 | Lactobacillus gasseri 3 | Lactobacillus gasseri 3 | 13 |
mgCST 3 | Lactobacillus crispatus 3 | Lactobacillus crispatus 3 | 12 |
mgCST 25 | Gardnerella vaginalis 5 | Gardnerella vaginalis 5 | 11 |
mgCST 7 | Lactobacillus gasseri 1 | Lactobacillus gasseri 1 | 11 |
mgCST 23 | Gardnerella vaginalis 3 | Gardnerella vaginalis 3 | 10 |
mgCST 12 | Lactobacillus iners 3 | Lactobacillus iners 3 | 9 |
mgCST 5 | Lactobacillus crispatus 5 | Lactobacillus crispatus 5 | 7 |
mgCST 15 | Lactobacillus jensenii 1 | Lactobacillus jensenii 1 | 5 |
mgCST 24 | Gardnerella vaginalis 4 | Gardnerella vaginalis 4 | 4 |
mgCST 6 | Lactobacillus crispatus 6 | Lactobacillus crispatus 6 | 4 |
mgCST 11 | Lactobacillus iners 2 | Lactobacillus iners 2 | 3 |
