Fig. 2: Functional landscapes of the fermented soy product (DC, DJ and FR) microbiomes and comparative analysis.
From: Chinese soy-based microbiome and associated microbial risks: a metagenomic investigation
A UpSet plot of annotated gene count(log10) by 5 databases. The number above each bar represent the total number of features in the corresponding intersection. B NMDS plot based on Bray–Curtis dissimilarity based on KO abundances. C Treemap of LEfSe analysis illustrating the number of food type-specific enriched functional elements across multiple categories, including KO, CARD, CAZy and MetaCyc pathways. D Bar plot showing food type-specific enriched CAZy gene counts across 6 CAZy gene families: glycoside hydrolases (GHs), glycosyltransferases (GTs), polysaccharide lyases (PLs), carbohydrate esterases (CEs), auxiliary activities (AAs) and carbohydrate-binding modules (CBMs). E Venn diagram depicting the distribution of annotated antibiotic resistance genes (ARGs) across three fermented soy products.
