Table 1 Results of growth simulations of single (S) and co-culture (C) of candidate GABA-producers using metabolic reconstructions
Consortium | Composition | Medium | Growth rate (h−1) | GABA (mmol gDW−1h−1) | Butyrate (mmol gDW−1h−1) |
---|---|---|---|---|---|
S1 | LSYM | INU | 0.06 | 0 | 0 |
S2 | LSYM | GLC | 0.30 | 0 | 0 |
S3 | CEUT | INU | 0.00 | 0 | 0 |
S4 | CEUT | GLC | 0.21 | 0 | 3.32 |
S5 | PDOR | INU | 0.20 | 0 | 0 |
S6 | PDOR | GLC | 0.56 | 0 | 0 |
S7 | BTHE | INU | 0.82 | 0.82 | 0 |
S8 | BTHE | GLC | 0.82 | 0.82 | 0 |
S9 | LBRE | INU | 0.16 | 0 | 0 |
S10 | LBRE | GLC | 0.78 | 0 | 0 |
S11 | LPLA | INU | 0.00 | 0 | 0 |
S12 | LPLA | GLC | 0.34 | 0 | 0 |
S13 | BADO | INU | 0.25 | 1.21 | 0 |
S14 | BADO | GLC | 0.55 | 0.35 | 0 |
S15 | LPAR | INU | 0.11 | 0 | 0 |
S16 | LPAR | GLC | 0.34 | 0 | 0 |
S17 | PVUL | INU | 0.28 | 0 | 0 |
S18 | PVUL | GLC | 0.79 | 0 | 0 |
C1a | BADO-BTHE | INU | 0.33 | 0.66 | 0 |
C2a | BADO-BTHE-PVUL | INU | 0.37 | 1.34 | 0 |
C1b | LPLA-CEUT | GLC | 0.28 | 0.73 | 1.54 |
C2b | LBRE-CEUT | GLC | 0.25 | 1.49 | 3.06 |
C3b | LPLA-CEUT-BADO | GLC | 0.30 | 1.37 | 1.47 |
C4b | LBRE-CEUT-BADO | GLC | 0.29 | 1.48 | 2.93 |
C5b | LPLA-LBRE-CEUT | GLC | 0.30 | 1.37 | 0.74 |
C6b | LPLA-BTHE-BADO-CEUT | GLC | 0.31 | 1.36 | 2.63 |
C7b | LPLA-BADO-CEUT | GLC | 0.30 | 1.35 | 1.96 |
C8b | LPLA-LBR-CEUT-BADO | GLC | 0.29 | 1.45 | 1.96 |
C9b | LBRE-BTH-CEUT-BADO | GLC | 0.28 | 1.48 | 4.39 |
C10b | LBR-BDOR-CEUT-BADO | GLC | 0.29 | 1.63 | 2.47 |
C11b | BADO-CEUT | INU | 1.23 | 0.87 | 0.05 |
C12b | LPLA-CEUT-BADO-LBRE-BTH | GLC | 0.30 | 1.35 | 1.98 |
C13b | LPLA-CEUT-BTH-BADO-LBRE | GLC | 0.29 | 1.43 | 2.29 |
C14b | LPLA-CEUT | GLC | 0.30 | 1.36 | 2.63 |
C1c | LBRE-LPAR | GLC | 0.31 | 0.66 | 0 |
C2c | LPLA-LPAR | INU | 0.43 | 1.22 | 0 |
C3c | BADO-LPAR | INU | 0.55 | 1.21 | 0 |
C4c | BTHE-LPAR | GLC | 0.31 | 0.66 | 0 |
C5c | BADO-BTHE-LPAR | INU | 1.22 | 0.78 | 0 |
C6c | PVUL-LPAR | GLC-INU | 0 | 0 | 0 |
C7c | LBRE-BTHE | GLC-INU | 0 | 0 | 0 |
C8c | LBRE-BTHE-LPAR | INU | 1.14 | 0 | 0 |
C9c | LSYM-BADO-LPAR | INU | 1.16 | 0 | 5.77 |
C10c | LPLA-LSYM-BADO | INU | 1.22 | 0 | 1.19 |
C11c | PDOR-LSYM-BADO | INU | 1.23 | 0.38 | 0.73 |
C12c | PDOR-LSYM-BADO-LPAR | INU | 0 | 0 | 0 |
C13c | LBRE-LPAR-BTHE-LSYM | INU | 0 | 0 | 0 |