Fig. 2 | npj Systems Biology and Applications

Fig. 2

From: Parsimonious Gene Correlation Network Analysis (PGCNA): a tool to define modular gene co-expression for refined molecular stratification in cancer

Fig. 2

Network visualization for BRCA and CRC. a BRCA network with modules color-coded, modules overlapping significantly with those in CRC share a common color. Modules corresponding to intrinsic BRCA classification (i) luminal (BRCA_M6), (ii) ERBB2/HER2 (BRCA_M5), (iii) basal/normal (BRCA_M14) and (iv) cell cycle (BRCA_M7). b CRC network, highlighted modules correspond to consensus molecular subtypes of CRC (i) CMS2-enterocyte (CRC_M3), (ii) CMS3-metabolic/goblet (CRC_M7), (iii) CMS1-hypermutated (CRC_M32) and (iv) CMS4-mesenchymal (CRC_M8). Fully annotated versions in Supplemental Fig. 10, and http://pgcna.gets-it.net/

Back to article page