Table 1 The comparison of the accurate subset GRN of each cell line to the related FunCoup network of the same genes.
From: Uncovering cancer gene regulation by accurate regulatory network inference from uninformative data
Cell line | Overlap | Links in FunCoup | Links in the inferred GRN | p-Value |
---|---|---|---|---|
A375 | 6 | 36 | 84 | 0.001* |
A549 | 4 | 106 | 130 | 0.83 |
HA1E | 6 | 90 | 96 | 0.14 |
HCC515 | 6 | 74 | 104 | 0.09 |
HEPG2 | 7 | 33 | 221 | 0.02* |
HT29 | 13 | 97 | 197 | 0.04* |
MCF7 | 19 | 79 | 125 | 5e−09* |
PC3 | 10 | 77 | 91 | 0.0004* |
VCAP | 10 | 88 | 170 | 0.08 |