Fig. 4: Growth rate of S. aureus GEMs in different media.
From: Curating and comparing 114 strain-specific genome-scale metabolic models of Staphylococcus aureus
All models with initial growth (see Table 1) were tested on the different media. For the GEMs by Bosi et al.32, the prefix “Bosi” was added to the model strain name. The other models are named according to their published model ID or, in case of the model from the VMH database, by the author. Media types are the synthetic nasal medium (SNM), synthetic cystic fibrosis medium (SCFM), gut medium, chemically defined medium (CDM), CDM with glucose (CDM_glc), and CDM with galactose (CDM_gal). Models that did not show growth in any of the tested media were excluded. The color-bar indicates the growth rate: the darker the color, the higher the growth rate of the model organism on the given medium.
