Table 5 The agreement functions used in boolmore
From: Automated model refinement using perturbation-observation pairs
Category | Agreement function (0 ≤ x ≤ 1) | Examples |
|---|---|---|
ON | f(x) = x | ABA=1, observing pHc. |
Some/ON | f(x) = 2x (x < 0.5) f(x) = 1 (x ≥ 0.5) | NO CA, observing Closure. The closure (i.e., reduction in the stomatal aperture) in various reported experiments varied between 30% and 60% of that in response to ABA. |
Some | f(x) = 4x (x < 0.25) f(x) = 1 (0.25 ≤ x < 0.75) f(x) = 4-4x (x ≥ 0.75) | 8-nitro-cGMP CA, observing Closure. The experimental closure response was around 25% of the response to ABA. |
OFF/Some | f(x) = 1 (x < 0.5) f(x) = 2-2x (x ≥ 0.5) | ABA = 1, S1P/PhytoS1P KO, observing Closure. S1P was depleted using a chemical, whose effect may reduce over time. Thus, the experimentally observed weak closure (instead of the expected lack of closure) may be due to the dissipation of the depletion. |
OFF | f(x) = 1-x | NO CA, observing ROS. |
