Extended Data Fig. 1: Quality control of single-cell RNA-seq data.
From: Atlas of amnion development during the first trimester of human pregnancy
(a) UMAP visualization depicting Seurat-defined clusters using pre-QC data. (b) Overlay of Souporcell-defined genotypes on the pre-QC UMAP. Cells clustering by the same genotype were regarded as maternal cells. (c) Distribution of cell type scores on the pre-QC UMAP. (d) Histogram presenting the number of cells across different scoring categories. scRNA-seq analyses depicted in this figure are generated from human amnion samples of the following developmental stages: CS16 (n = 1), CS17 (n = 1), CS19 (n = 1), CS22 (n = 1).
