Extended Data Fig. 3: Comparison of composition and load of the 14 barcoded isolates on different A. thaliana genotypes.
From: Commensal Pseudomonas strains facilitate protective response against pathogens in the host plant
a. Nonmetric multidimensional scaling (NMDS) based on Bray-Curtis distances between six A. thaliana genotypes, in one representative experiment (October 2018). Each synthetic community was analysed separately. The abundance of all 14 barcoded isolates was considered, also among PathoCom and CommenCom to account for cross contaminations and technical distortions. Shapes denote the different genotypes, and bacterial load is indicated from blue to red. b. Isolate load of the six A. thaliana genotypes, among the three synthetic communities. Isolate load was defined as the cumulative abundance of all barcoded isolates that composed a synthetic community. Dots indicate the median estimates, and vertical lines 95% Bayesian credible intervals of the fitted parameter, following the model [log10(isolate load) ~ genotype + experiment + error].
