Fig. 1: Diversity and quality of the rMAGs and their representativeness in the meta-omic dataset.
From: Forecasting the dynamics of a complex microbial community using integrated meta-omics
a, Phylogenetic tree of the rMAGs in the LAO community (generated using GTDB-Tk79) contains the 126 bacterial rMAGs in the system (the 18 archaeal MAGs were not included). The heat map ring contains the CheckM quality measures per rMAG (completeness, contamination and MAG-originally strain heterogeneity), which were filtered to be at least 75% complete and at a maximum 25% contaminated (median: 2%). The violin plots contain the time-averaged (train time series) depth profiles over the contigs forming the rMAG. The two sections of the tree noted as * and ** highlight the strains of M. parvicella and Moraxella sp., respectively. b. The cumulative length of the contigs (longer than 1,000 nt; see Methods) for the 25 most abundant phyla displayed for the rMAGs and unbinned contigs.
