Extended Data Fig. 8: Additional in vitro and in vivo phenotypes of ∆BF3086 and ∆BF3134.
From: Spatially distinct physiology of Bacteroides fragilis within the proximal colon of gnotobiotic mice
a, BF3086 and BF3134 biological replicates. Fold-change for individual mice indicate consistently induced expression of BF3086 and BF3134 in the mucus and tissue relative to the lumen. b-e, Growth of individual B. fragilis strains in a defined minimal medium with b, inulin, c, pullulan, d, mannan, or e, pig mucin (mean and standard error, n = 8 independent cultures). f-h, Quantitative RT–PCR (∆∆Ct method normalized to gyrB) on fecal samples of mice mono-colonized with indicated strains of B. fragilis, assessing the expression of f, ccfC (BF3581), g, PSB flippase (BF1900), and h, PSC flippase (BF1014) (mean and standard error, Tukey ANOVA, n = 4 animals).
