Extended Data Fig. 2: Abundance of bacterial gene orthologs at birth and 1 month.
From: Bacterial colonization reprograms the neonatal gut metabolome
a, The total number of KEGG gene orthologs per sample was higher at 1 month relative to birth (P = 9×10−16, two-sided Wilcoxon signed-rank test, n = 88 per group). b, Genes increasing in abundance at 1 month relative to birth (top 100 shown, P < 0.001 after correction for false discovery rate, two-sided Wilcoxon signed-rank test, n = 88 per group). Points show the median value, error bars show the interquartile range. c, The number of glycoside hydrolase gene types per sample (P = 9×10−16) and total abundance of glycoside hydrolase genes (P = 7×10−13) in each sample increased from birth to 1 month (two-sided Wilcoxon signed-rank test, n = 88 per group). Boxes indicate the median and interquartile distance, whiskers indicate maximum and minimum data points within 1.5 times the interquartile range, points represent values outside this range.
