Extended Data Fig. 2: SCFA producing bacteria are depleted in the rUTI gut.

Cumulative relative abundances of (a) butyrate and (b) propionate producing bacterial species in rUTI and control samples. Box plots display the median (center line), 25th and 75th percentiles (box), as well as the 5th and 95th percentiles (whiskers). Within-host average relative abundances of individual species for (c) butyrate and (d) propionate producers are also shown. Horizontal lines denote the mean relative abundance in rUTI (red) and control (blue) women.