Extended Data Fig. 2: Absolute abundances of other bacterial species in the defined community across different time points and locations. | Nature Microbiology

Extended Data Fig. 2: Absolute abundances of other bacterial species in the defined community across different time points and locations.

From: Prevotella copri and microbiota members mediate the beneficial effects of a therapeutic food for malnutrition

Extended Data Fig. 2

(a) Absolute abundances of organisms which were significantly higher with either B. infantis Bg2D9 (Arm 1 vs. Arm 2), or with the combination of B. infantis Bg2D9 and Prevotella (Arm 1 vs. Arm 3) in fecal samples collected at P53 (n = 8, 5, and 7 offspring for arms 1, 2, and 3, respectively). The adjusted P-values for B. obeum (Arm 1 vs. Arm 3) and D. longicatena (Arm 1 vs. Arm 2) are 2x10-4 and 7x10-4, respectively. (b, c) Absolute abundances of the same organisms in cecal contents collected at P53 (panel b) and in fecal samples collected before weaning at P21 (panel c). Mean values ± SD are shown. Each dot represents an individual animal. P-values were calculated by the Kruskal-Wallis test followed by post-hoc Dunn’s test with Bonferroni correction. N.S., not significant (P > 0.05).

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