Extended Data Fig. 3: Systems genetics of gene expression in the Japonica populations in wet and dry field environments.
From: The strength and pattern of natural selection on gene expression in rice
a, Monitoring the Japonica populations, with 3 × 84 accessions = 252 individuals planted in both the wet and dry fields, for flowering success, fecundity fitness and total lifetime fitness (legend as in Extended Data Fig. 1b, c). b, Environmental bias for transcript expression. Magenta and blue dots represent transcripts showing a 1.5-fold difference in expression between the wet and dry field environments, respectively. ANOVA, Japonica environment FDR-adjusted q < 0.01, n = 84 accessions. c, Distribution of broad-sense heritabilities (H2) for transcripts with significant expression polymorphism. ANOVA, Japonica genotype FDR-adjusted q < 0.01, n = 84 accessions. d, Distribution of cross-environment genetic correlations (rWD) for transcripts showing significant (blue) genotype × environment (G × E) variance. ANOVA, Japonica genotype × environment FDR-adjusted q < 0.01, n = 84 accessions.
