Extended Data Fig. 6: Genome and transcriptomes of Ca. C. neptuna.
From: Terrestrial-type nitrogen-fixing symbiosis between seagrass and a marine bacterium
General genome characteristics for the novel species Ca. C. neptuna and its closest relative C. diazotrophica (DSM18577) (top). Ca. C. neptuna genome is represented circularized (bottom). Circles from the inside to the outside: (1) GC content, (2) GC skew, (3) Illumina metagenome (June 2014) coverage (coverage range 0-250), (4) PacBio metagenome (August 2016) coverage (coverage range 0-200), (5-9) gene transcription in Illumina-based transcriptomes plotted as TPM for protein coding locus tags (TPM range 0-1000; genes with TPM values > 1000 are highlighted in dark blue), (10) regions present in C. diazotrophica based on BLASTn searches, shown are regions with similarity between 50% (grey) − 100% (orange), (11) selected features (genes and gene clusters) including highly transcribed ones (blue, mean expression across all transcriptomes >1000 TPM). A list of genes and features is included in the Supplementary Information.
