Extended Data Fig. 8: Gating strategy and pseudolongitudinal time course of transcription factor expression.

a, Gating strategy TCF1⁺, T-BET⁺, EOMES⁺, and TOX⁺ cells in CoV2-Dex^– and CoV2-Dex⁺ cells. b, Percentages of TCF1⁺, T-BET⁺, EOMES⁺, and TOX⁺ cells in CoV2-Dex^– and CoV2-Dex⁺ cells (left) six months and (right) one year after infection (n = 24 six months, n = 29 one year). c, Linear regression of frequencies of TCF1⁺, T-BET⁺, EOMES⁺, and TOX⁺ cells in CoV2-Dex⁺ cells as a function of time since symptom onset (n = 81). P-values were calculated with t-statistic. d, Expression of transcription factors in T_effector/T_EM and T_EMRA in CoV2-Dex⁺ cells in acute infection and six months and one year after infection (n = 24 acute, n = 24 six months, n = 26 one year). P-values were calculated using a Wilcoxon signed-rank test in b and d. All tests were performed two-sided.