Fig. 4: Pan-genome-based map of large inversions.
From: Genome evolution and diversity of wild and cultivated potatoes
a, Inversion map of 20 landraces and 4 CND accessions. The orange rectangles denote megabase-scale inversions. The dashed lines mark the regions containing inversions presented in either E4-63 or A6-26. b, The Hi-C-validated 5.8 Mb inversion event, using DM as the reference genome. Hi-C contact maps at 25-kb resolution for accession PG5068 (wild/CND haplotype) and PG6245 (DM haplotype), using Hi-C data from the homozygous line A6-26 (DM haplotype). Wild/CND haplotype, accessions carrying the inversion; DM haplotype, accessions without the inversion. c, Number of recombination events per 5 Mb on chromosome 3. The grey bar indicates the region with reduced recombination around the 5.8-Mb inversion.
