Extended Data Fig. 4: Reconstructed evolutionary paths of E. gallinarum within individual hosts.
From: Within-host evolution of a gut pathobiont facilitates liver translocation
Reconstructed phylogenetic histories of E. gallinarum isolates from mouse 1 (a), mouse 2 (b), mice 3–5 (c), and mice 6–8 (d). The mouse 7 is also presented in Fig. 2a. Bar plots show bacterial load recovered from the liver of each monocolonized mouse. n = 1 mouse. Circles represent sequenced isolates and squares represent hypothetical intermediate genotypes. Different colours indicate distinct genotypes. Arrows connect related genotypes and dashed lines connect genetically identical isolates. Liver and faecal populations are separated by a blue dashed line. The schematics in a-d were created using BioRender.
